PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_008222208.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
Family TCP
Protein Properties Length: 269aa    MW: 28739.1 Da    PI: 10.2702
Description TCP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_008222208.1genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1TCP123.42.5e-3828114288
             TCP   2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssasec.eaesssssasnsssg 88 
                     a+k+++++++h kv+gR+RR+R++a+caar+F+L++eLG+++d++ti+WLlqqa+p+i+++tg+++ +as+   a+ss+s+++ ss +
  XP_008222208.1  28 APKRSSNKDRHKKVDGRGRRIRMPALCAARVFQLTRELGHKSDGETIQWLLQQAEPSIIAATGSGTVPASALaAAGSSVSEQG-SSVS 114
                     789*************************************************************9999988844444444433.3333 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF036341.7E-3133133IPR005333Transcription factor, TCP
PROSITE profilePS5136927.3893488IPR017887Transcription factor TCP subgroup
Sequence ? help Back to Top
Protein Sequence    Length: 269 aa     Download sequence    Send to blast
MAENKPAQIK DLQILKANKD DENKKHLAPK RSSNKDRHKK VDGRGRRIRM PALCAARVFQ  60
LTRELGHKSD GETIQWLLQQ AEPSIIAATG SGTVPASALA AAGSSVSEQG SSVSSVSSGL  120
HTRMEGLIRP SVGSEGSANW AFHMGRSNVA SGVWPLPFLS GVRSGFDQNS GQATVNFGSE  180
NLNIMQHKFG FHGFDVPGMN LGSMGFPTIL SGSNQQVPGL ELGLSQDGHI GVVSSQALTQ  240
FHQHKGQRPG GVASFNQQQQ HQQPSDTNE
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_008222208.10.0PREDICTED: transcription factor TCP20-like
SwissprotQ9LSD51e-64TCP20_ARATH; Transcription factor TCP20
TrEMBLM5XSE71e-178M5XSE7_PRUPE; Uncharacterized protein
STRINGPOPTR_0003s16630.19e-96(Populus trichocarpa)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF33393269
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G27010.11e-59TCP family protein